Exon
|
DNA: Allele 1
|
RE-Site
|
RNA
|
Protein
|
Frequency
|
Disease
|
Reference
|
DNA/RNA
|
Technique
|
FOXL2db-ID
|
Remarks
|
DNA allele 1 (Crisponi et al. 2001)
|
Phenotype
|
Clinical data
|
Ethnic origin
|
Geographic origin
|
Domain
|
RNA Sequence Change
|
RNA Frame Change
|
Protein Sequence Outcome
|
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. 2001 |
Genomic DNA |
SEQ |
FOXL2_00058 |
|
g.909_938dup |
Familial, type 2 |
5-generation BPES type 2 pedigree, affected females transmit disease. |
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. 2001 |
Genomic DNA |
SEQ |
FOXL2_00059 |
|
g.909_938dup |
Familial, type 2 |
2-generation BPES type 2 family, affected mother transmits BPES to daughter. |
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. 2001 |
Genomic DNA |
SEQ |
FOXL2_00060 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in sporadic male, de novo. |
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. 2001 |
Genomic DNA |
SEQ |
FOXL2_00061 |
|
g.909_938dup |
Familial, type 2 |
4-generation BPES type 2 family (Small et al. 1995) |
Caucasoid/Europoid |
US |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. 2001 |
Genomic DNA |
SEQ |
FOXL2_00062 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 5-year old male patient. |
Caucasoid/Europoid |
IT |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. 2001 |
Genomic DNA |
SEQ |
FOXL2_00063 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 17-year old female patien (no endocrinological data) |
Caucasoid/Europoid |
US |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Ramirez-Castro et al. 2002 |
Genomic DNA |
SEQ |
FOXL2_00064 |
|
g.909_938dup |
Familial, type 2 |
3-generation BPES type 2 pedigree. Affected female transmits disease. |
|
CO |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Ramirez-Castro et al. 2002 |
Genomic DNA |
SEQ |
FOXL2_00065 |
|
g.909_938dup |
Familial, type 2 |
3-generation BPES type 2 pedigree. Affected female transmits disease. |
|
CO |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00066 |
|
g.909_938dup |
Familial, type 2 |
3-generation BPES type 2 pedigree. |
Caucasoid/Europoid |
DE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00067 |
|
g.909_938dup |
Familial, type unknown |
2-generation BPES pedigree (male-to-male transmission). |
Caucasoid/Europoid |
BE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00068 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 10-year old sporadic female, de novo. |
Caucasoid/Europoid |
FR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Dollfus et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00069 |
|
g.909_938dup |
Familial, type unknown |
BPES in Algerian father and prepubertal son and daughter. |
|
DZ |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Dollfus et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00070 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 25-year old male patient. |
|
DZ |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. (2002) |
Genomic DNA |
SEQ |
FOXL2_00071 |
|
g.909_938dup |
Familial, type 2 |
Irregularity of periods, difficulty in conceiving. |
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. (2002) |
Genomic DNA |
SEQ |
FOXL2_00072 |
|
g.909_938dup |
Familial, type 2 |
|
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. (2002) |
Genomic DNA |
SEQ |
FOXL2_00073 |
|
g.909_938dup |
Sporadic, type unknown |
|
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. (2002) |
Genomic DNA |
SEQ |
FOXL2_00074 |
|
g.909_938dup |
Sporadic, type unknown |
|
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Crisponi et al. (2002) |
Genomic DNA |
SEQ |
FOXL2_00075 |
|
g.909_938dup |
Familial, type unknown |
|
Unknown |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00111 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 8-y old female patient. Associated feature: mild 2/3 skin syndactyly |
Caucasoid/Europoid |
GB |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00112 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 3-y male sporadic patient |
Caucasoid/Europoid |
NL |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00113 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 31-y sporadic female. Pregnancy after IVF treatment at 31 y. No hypergonadotrophic hypogonadism. |
Caucasoid/Europoid |
BE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00114 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 12-y old male patient, pediatric Burkitt lymphoma |
Caucasoid/Europoid |
NL |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00115 |
|
g.909_938dup |
Familial, type 2 |
2-generation BPES pedigree; affected female has unaffected child at 30 y, oligomenorrhea, irregular cycles, FSH borderline high. |
Caucasoid/Europoid |
NO |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00132 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 3-year old female sporadic patient |
Caucasoid/Europoid |
BE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Cha et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00133 |
|
g.909_938dup |
Familial, type 2 |
3-generation BPES type 2 family. Two affected female transmit the disease |
Mongoloid |
KR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Cha et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00135 |
|
g.909_938dup |
Familial, type unknown |
2-generation BPES pedigree (male tot male transmission) |
Mongoloid |
KR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Cha et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00136 |
|
g.909_938dup |
Familial, type unknown |
2-generation BPES pedigree (male-to-male transmission) |
Mongoloid |
KR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Cha et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00137 |
|
g.909_938dup |
Familial, type 2 |
4-generation BPES type 2 family. Two affected females transmit the disease |
Mongoloid |
KR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Cha et al. 2003 |
Genomic DNA |
SEQ |
FOXL2_00138 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 12-y old female sporadic patient |
Mongoloid |
KR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00160 |
|
g.909_938dup |
Familial, type 2 |
2-generation BPES type II pedigree. Affected female transmits disease |
Caucasoid/Europoid |
IT-BE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00161 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in 18-m old sporadic female patient |
Caucasoid/Europoid |
|
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00162 |
|
g.909_938dup |
Sporadic, type 2 |
BPES in 31-y sporadic female patient |
Caucasoid/Europoid |
BE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00163 |
|
g.909_938dup |
Sporadic, type 1 |
BPES in 37-y old sporadic female, menarche at 13 years, very infrequent and irregular menses, one spontaneous conception at 34 |
Caucasoid/Europoid |
UK |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00164 |
|
g.909_938dup |
Familial, type unknown |
1-y old and 4-y old sisters with BPES |
Caucasoid/Europoid |
AU |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00165 |
|
g.909_938dup |
Familial, type 2 |
2-generation BPES type II family, affected mother transmits BPES to son |
Caucasoid/Europoid |
FI |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00177 |
|
g.909_938dup |
Unknown |
|
Mongoloid |
SE |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00178 |
|
g.909_938dup |
Sporadic, type 1 |
BPES and POF in 35-y old female |
Caucasoid/Europoid |
FR |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Nallathambi et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00182 |
|
g.909_938dup |
Familial, type 2 |
3-generation BPES type II family |
Unknown |
IN |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES and bilateral Duane syndrome |
Vincent et al. 2005 |
Genomic DNA |
SEQ |
FOXL2_00183 |
|
g.909_938dup |
Sporadic, type unknown |
BPES and Duane syndrome in 18-m old sporadic female patient |
Caucasian |
NZ |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00184 |
|
g.909_938dup |
Sporadic, type unknown |
BPES in a 1-year old sporadic female patient. She also has a small apical muscular ventricular septal heart defect. |
Caucasoid/Europoid |
BE |
Polyala |
Insertion |
Inframe |
Internal insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
Genomic DNA |
SEQ |
FOXL2_00185 |
|
g.909_938dup |
Familial, type unknown |
BPES in 4-year old male patient and his 29-year old father |
Caucasoid/Europoid |
NL |
Polyala |
Insertion |
Inframe |
Internal insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
Mari et al., 2006 |
DNA |
SEQ |
FOXL2_00239 |
|
g.909_938dup |
Sporadic |
BPES in male patient with mild syndactyly between the 2nd and 3rd toe bilaterally, a broas and flat nasal bridge, high vaulted and narrow palate and an asymmetry in the maxillary region.
|
Caucasoid/Europoid |
IT |
Polyala |
Insertion |
Inframe |
Internal Insertion |
01 |
c.672_701dup |
|
|
p.Ala224_Ala234dup |
|
BPES |
De Baere et al. (unpublished) |
DNA |
SEQ |
FOXL2_00258 |
|
g.909_938dup |
Familial, type unknown |
2-generation BPES family. Affected 36-y old male transmits the disease to his 2 daughters.
|
Caucasoid/Europoid |
US |
polyAla |
Insertion |
Inframe |
Internal insertion |